Basic Information
Locus ID:
Oco04G007470
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 7330284 | 7335378 | + | Oco04G007470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 62,611.39 Da | 47.79 | 77.23 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 152 | 230 | 1.00132E-14 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 266 | 362 | 5.3E-10 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 153 | 244 | 2.3E-14 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 157 | 244 | 1.15E-14 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 443 | 558 | 1.11E-5 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 281 | 385 | 7.1E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 148 | 280 | 4.0E-19 | IPR011333 |
| SMART | SM00875 | BACK_2 | 260 | 364 | 2.9E-9 | IPR011705 |
| SMART | SM00225 | BTB_4 | 149 | 247 | 1.1E-12 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 156 | 216 | 13.611801 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_015627030.1 | BTB/POZ domain-containing protein POB1 [Oryza sativa Japonica Group] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1F7W8 | BTB domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_013128 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology