Basic Information
Locus ID:
Oco04G006700
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 6213225 | 6217708 | - | Oco04G006700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 68,037.20 Da | 40.34 | 98.44 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 73 | 9.3E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 299 | 568 | 9.6E-45 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 125 | 146 | 0.091 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 280 | 571 | 2.05E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 206 | 2.12E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 579 | 1.2E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 215 | 1.5E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 269 | 373 | 3.6E-36 | - |
| SMART | SM00220 | serkin_6 | 298 | 576 | 1.5E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 123 | 147 | 8.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 171 | 194 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 99 | 122 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 298 | 576 | 36.951237 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 420 | 432 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 304 | 326 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_052142781.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 [Oryza glaberrima] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | I1NYU5 | Protein kinase domain-containing protein OS=Oryza glaberrima OX=4538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology