Basic Information
Locus ID:
Oco04G006330
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 5756111 | 5760437 | - | Oco04G006330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 147,744.13 Da | 37.51 | 100.45 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1031 | 1311 | 2.0179E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1028 | 1311 | 1.1E-42 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 85 | 128 | 3.1E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 216 | 275 | 1.1E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 858 | 874 | 0.051 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 686 | 850 | 3.7E-29 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 497 | 533 | 7.1E-7 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 66 | 6.3E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 424 | 930 | 1.93E-35 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 73 | 427 | 1.57E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1004 | 1311 | 4.72E-71 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 850 | 3.1E-49 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 284 | 2.0E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 184 | 8.4E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 885 | 940 | 4.9E-10 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1007 | 1115 | 2.1E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 545 | 604 | 3.5E-10 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 674 | 884 | 1.5E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 544 | 7.5E-67 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1116 | 1329 | 3.1E-61 | - |
| SMART | SM00369 | LRR_typ_2 | 496 | 519 | 29.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 1025 | 1330 | 4.3E-39 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 238 | 262 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 520 | 544 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 858 | 882 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 685 | 930 | 2.2E-12 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 189 | 214 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 290.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 117 | 139 | 7.088198 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1025 | 1312 | 38.20916 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 685 | 980 | 25.5875 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 93 | 115 | 7.427029 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1161 | 1173 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 520 | 533 | 3.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 118 | 131 | 3.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28490.1 | Leucine-rich receptor-like protein kinase family protein. member of Receptor kinase-like protein family | 0 |
| RefSeq | XP_015623345.1 | receptor-like protein kinase HSL1 isoform X1 [Oryza sativa Japonica Group] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1FBK8 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_023467 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology