Basic Information
Locus ID:
Oco04G005240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 4533736 | 4544525 | + | Oco04G005240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 43,013.09 Da | 51.49 | 55.42 | -1.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 189 | 273 | 8.3E-28 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 109 | - | - |
| Coils | Coil | Coil | 204 | 238 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_015688384.2 | protein WVD2-like 5 [Oryza brachyantha] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | J3LAN1 | TPX2 domain-containing protein OS=Oryza brachyantha OX=4533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology