Basic Information
Locus ID:
Oco04G004590
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 3949235 | 3954646 | + | Oco04G004590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 72,680.41 Da | 46.89 | 88.58 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 370 | 641 | 8.92951E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 69 | 9.9E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 96 | 153 | 1.0E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 368 | 638 | 3.1E-43 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 201 | 4.08E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 343 | 638 | 1.2E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 441 | 5.9E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 209 | 1.4E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 658 | 1.5E-57 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 364 | 641 | 37.021904 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 97 | 110 | 4.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 140 | 153 | 4.8E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 243 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_015627233.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Oryza sativa Japonica Group] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0JWM7 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology