Basic Information
Locus ID:
Oco04G003730
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 3118546 | 3128694 | - | Oco04G003730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 83,501.76 Da | 54.53 | 90.72 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 125 | 183 | 2.4E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 509 | 773 | 1.4E-31 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 242 | 3.78E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 474 | 773 | 6.93E-56 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 467 | 575 | 3.0E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 266 | 9.4E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 577 | 775 | 8.4E-51 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 499 | 774 | 29.304741 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 386 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_040376671.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Oryza brachyantha] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | J3LA34 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology