Basic Information
Locus ID:
Oco04G003610
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 3015251 | 3017417 | + | Oco04G003610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 71,121.65 Da | 40.40 | 90.85 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 109 | 169 | 7.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 373 | 640 | 2.0E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 374 | 652 | 1.23E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 225 | 3.78E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 445 | 1.0E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 200 | 5.3E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 658 | 1.4E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 244 | 1.6E-6 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 624 | 25.573366 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 656 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 648 | 670 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50610.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_040376282.1 | pollen receptor-like kinase 5 [Oryza brachyantha] | 0 |
| Q9LPT1 | Pollen receptor-like kinase 5 OS=Arabidopsis thaliana OX=3702 GN=PRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1D354 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_009143 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology