Basic Information
Locus ID:
Oco04G000550
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 481677 | 484772 | - | Oco04G000550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 107,891.70 Da | 37.24 | 102.35 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 67 | 9.8E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 527 | 586 | 1.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 710 | 910 | 1.5E-34 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 302 | 588 | 1.41E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 702 | 975 | 2.32E-59 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 348 | 6.12E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 619 | 1.1E-61 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 180 | 276 | 1.3E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 179 | 1.5E-35 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 794 | 5.1E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 795 | 985 | 2.6E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 379 | 5.9E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 429 | 453 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 573 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 261 | 285 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 213 | 19.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 708 | 975 | 5.4E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 708 | 982 | 30.011442 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 714 | 738 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 504 | 517 | 4.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 549 | 562 | 4.3E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 976 | 1020 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_025878980.1 | MDIS1-interacting receptor like kinase 1 [Oryza sativa Japonica Group] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0JUK3 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology