Basic Information
Locus ID:
Oco03G021740
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 27972001 | 27975549 | - | Oco03G021740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 13,286.21 Da | 45.95 | 93.33 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 8 | 95 | 2.71466E-43 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 102 | 2.2E-36 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 99 | 1.53E-27 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 1.7E-40 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 106 | 5.0E-43 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 76 | 10.309861 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_040376442.1 | membrane-anchored ubiquitin-fold protein 3 isoform X2 [Oryza brachyantha] | 0 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6G1F7Y5 | Membrane-anchored ubiquitin-fold protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_013790 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology