Basic Information
Locus ID:
Oco03G017930
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 23726235 | 23727937 | - | Oco03G017930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.20 | 23,915.42 Da | 61.19 | 77.48 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 107 | 199 | 2.9E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 95 | 201 | 2.38E-16 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 92 | 185 | 1.1E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 104 | 210 | 13.008241 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 52 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18750.2 | with no lysine (K) kinase 6. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. | 0 |
| RefSeq | XP_015625440.1 | probable serine/threonine-protein kinase WNK4 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q6EU49 | Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK4 PE=2 SV=1 | 0 | |
| TrEMBL | A2X877 | non-specific serine/threonine protein kinase OS=Oryza sativa subsp. indica OX=39946 GN=OsI_08436 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg5734 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg61370 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003001 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl03738, Sgl08844 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103695827 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.358.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g28700 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00016568, Pov_00017761 |
| Poaceae | Oryza coarctata | 2 | Oco03G017930, Oco09G000450 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-22306 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG11.121 |