Basic Information
Locus ID:
Oco03G017130
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 22944738 | 22948076 | - | Oco03G017130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 44,346.04 Da | 50.41 | 103.89 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 172 | 397 | 2.2E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 127 | 401 | 9.43E-43 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 124 | 404 | 3.7E-45 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 123 | 402 | 25.926716 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07620.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015623310.1 | putative kinase-like protein TMKL1 [Oryza sativa Japonica Group] | 0 |
| P33543 | Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana OX=3702 GN=TMKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0K347 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg14129, jg2437, jg34045 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_16008 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018184 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg15187, Sbi_jg56016 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26495 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020207 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl02215, Sgl07371 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000029427, gene:ENSEOMG00000042963 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0009120, CQ.Regalona.r1.3BG0009430 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30187530 |
| Apiaceae | Apium graveolens | 1 | Ag10G02694 |
| Arecaceae | Cocos nucifera | 1 | COCNU_10G003590 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103704654, gene-LOC103716327 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.3200.V1.1, AsparagusV1_10.754.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri17G22912, Ftri18G06390, Ftri6G31384, Ftri9G05106 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G07620.1, AT5G61570.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10004479m.g.v1.0, Thhalv10013915m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp2g24770.v2.2, Sp6g35260.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g053340.2N, BniB08g003350.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | CeqSG0251 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G1267 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g08370 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g20630 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2382 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00012345 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G23702 |
| Poaceae | Echinochloa crus-galli | 7 | AH07.2861, AH09.1818, BH07.2679, BH09.1989, CH07.2730 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0139640, gene-QOZ80_2BG0195320 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0189950.1, HORVU.MOREX.r3.6HG0600660.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_024121, gene-QYE76_045363 |
| Poaceae | Oryza coarctata | 4 | Oco03G017130, Oco04G017860, Oco07G012270, Oco08G011990 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g43870.1, LOC_Os04g46320.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G217400, gene-BS78_06G179500 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0203954, Pt_Chr0204024, Pt_Chr0301793, Pt_Chr0301809 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr06G005940, Chr09G024410, Chr13G005840, Chr15G007570 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G709600, Tel6E01G460100 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC2AG060110, gene_TRIDC2BG063550 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS2A02G416400.1, TraesCS2B02G435300.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb074870_P001, Zm00001eb186420_P002 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-37263, nbis-gene-5470, nbis-gene-9282 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g14042, Zma_g16798, Zma_g20180, Zma_g21736 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG11.1483 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g13420 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1245, evm.TU.Scaffold_4_RagTag.208 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-12435, nbisL1-mrna-12546, nbisL1-mrna-29143 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-18620, nbisL1-mrna-6845 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-12814, nbisL1-mrna-2087 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000008l.126, evm.TU.utg000010l.284 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00001237, Maker00008888 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-2402, nbisL1-mrna-577 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-6202, nbisL1-mrna-8882 |
| Salicaceae | Populus euphratica | 1 | populus_peu08179 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631679 |
| Solanaceae | Solanum chilense | 1 | SOLCI007312600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012131 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5371 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G0186 |
| Zosteraceae | Zostera marina | 1 | Zosma05g30590.v3.1 |