Basic Information
Locus ID:
Oco03G012900
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 18400410 | 18402697 | + | Oco03G012900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 35,491.50 Da | 40.15 | 65.06 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 49 | 1.1E-6 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 132 | 178 | 3.4E-11 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 109 | 303 | 3.4E-26 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 58 | 1.09E-9 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 75 | 334 | 9.7E-25 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 67 | 2.3E-5 | - |
| SMART | SM00256 | fbox_2 | 18 | 58 | 7.3E-6 | IPR001810 |
| SMART | SM00612 | kelc_smart | 144 | 191 | 3.9E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 107 | 143 | 12.0 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_015624832.1 | F-box/kelch-repeat protein SKIP20 [Oryza sativa Japonica Group] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6G1F5F5 | F-box domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_008664 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology