Basic Information
Locus ID:
Oco03G009520
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 13110396 | 13112426 | + | Oco03G009520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 63,795.52 Da | 45.02 | 92.09 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 46 | 243 | 8.66209E-48 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 63 | 198 | 1.5E-23 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 332 | 506 | 1.6E-28 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 305 | 551 | 2.16E-56 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 46 | 241 | 8.17E-33 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 399 | 557 | 4.8E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 283 | 398 | 8.2E-24 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 38 | 248 | 1.9E-31 | - |
| SMART | SM00220 | serkin_6 | 322 | 548 | 1.0E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 593 | 24.131697 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 443 | 455 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_015624294.1 | probable L-type lectin-domain containing receptor kinase S.7 [Oryza sativa Japonica Group] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0JZJ6 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology