Basic Information
Locus ID:
Oco03G007150
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 7368971 | 7374634 | + | Oco03G007150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 61,860.59 Da | 47.73 | 75.97 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 146 | 224 | 1.00774E-12 | - |
| Pfam | PF00651 | BTB/POZ domain | 147 | 238 | 2.2E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 260 | 356 | 7.0E-10 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 438 | 552 | 1.31E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 151 | 238 | 3.09E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 144 | 274 | 1.5E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 275 | 379 | 1.6E-13 | - |
| SMART | SM00225 | BTB_4 | 143 | 241 | 1.4E-12 | IPR000210 |
| SMART | SM00875 | BACK_2 | 254 | 358 | 1.4E-7 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 140 | 210 | 13.942714 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_052144368.1 | BTB/POZ domain-containing protein POB1-like [Oryza glaberrima] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1F7W8 | BTB domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_013128 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology