HalophFGD

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Basic Information
Locus ID: Oco03G006830
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
LG03 6872341 6874456 - Oco03G006830
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.92 38,179.89 Da 52.53 92.53 0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 8 45 2.8E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 8 82 1.57E-9 IPR036047
SUPERFAMILY SSF50965 Galactose oxidase, central domain 32 212 4.05E-5 IPR011043
Gene3D G3DSA:1.20.1280.50 - 7 48 3.0E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_015623785.1 uncharacterized protein LOC4328882 [Oryza sativa Japonica Group] 0
TrEMBL A0A0D9VEA5 F-box domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plantaginaceae Plantago ovata 1 Pov_00027636
Poaceae Echinochloa crus-galli 26 AH01.2562, AH01.2591, AH01.2597, AH05.2770, AH05.2771 ...
AH09.150, BH01.2897, BH01.2916, BH01.2925, BH03.3339, BH03.3340, BH05.2870, BH08.1494, BH08.1495, BH09.232, CH01.3090, CH01.3112, CH01.3122, CH01.3126, CH01.3141, CH03.3527, CH05.2913, CH07.936, CH09.203, CH09.208, CH09.2699
Poaceae Eleusine coracana subsp. coracana 39 gene-QOZ80_2AG0107940, gene-QOZ80_2AG0107950 ...
gene-QOZ80_2AG0107960, gene-QOZ80_2AG0107970, gene-QOZ80_2AG0118950, gene-QOZ80_2AG0118970, gene-QOZ80_2AG0119680, gene-QOZ80_2AG0119750, gene-QOZ80_2AG0119760, gene-QOZ80_2BG0161560, gene-QOZ80_2BG0161570, gene-QOZ80_2BG0161580, gene-QOZ80_2BG0161590, gene-QOZ80_2BG0161600, gene-QOZ80_2BG0161610, gene-QOZ80_2BG0172790, gene-QOZ80_2BG0173140, gene-QOZ80_2BG0173180, gene-QOZ80_4AG0327120, gene-QOZ80_4BG0359080, gene-QOZ80_5AG0375520, gene-QOZ80_5AG0376210, gene-QOZ80_5AG0376230, gene-QOZ80_5AG0376240, gene-QOZ80_5AG0376260, gene-QOZ80_5AG0382230, gene-QOZ80_5AG0382650, gene-QOZ80_5AG0390310, gene-QOZ80_5BG0422920, gene-QOZ80_5BG0423440, gene-QOZ80_5BG0423450, gene-QOZ80_5BG0423460, gene-QOZ80_5BG0423470, gene-QOZ80_5BG0423480, gene-QOZ80_5BG0429160, gene-QOZ80_5BG0438180, gene-QOZ80_7AG0561800, gene-QOZ80_7BG0595200, gene-QOZ80_8AG0628170
Poaceae Hordeum vulgare 25 HORVU.MOREX.r3.1HG0055250.1.CDS1 ...
HORVU.MOREX.r3.1HG0093820.1, HORVU.MOREX.r3.2HG0128260.1.CDS1, HORVU.MOREX.r3.3HG0229360.1.CDS1, HORVU.MOREX.r3.5HG0495310.1, HORVU.MOREX.r3.5HG0495320.1, HORVU.MOREX.r3.5HG0515390.1, HORVU.MOREX.r3.5HG0523120.1.CDS1, HORVU.MOREX.r3.6HG0540230.1, HORVU.MOREX.r3.6HG0540250.1.CDS1, HORVU.MOREX.r3.6HG0540280.1, HORVU.MOREX.r3.6HG0540390.2, HORVU.MOREX.r3.6HG0547490.1, HORVU.MOREX.r3.6HG0547550.1, HORVU.MOREX.r3.6HG0547690.1.CDS1, HORVU.MOREX.r3.6HG0547720.1, HORVU.MOREX.r3.6HG0548310.1.CDS1, HORVU.MOREX.r3.6HG0548510.1, HORVU.MOREX.r3.6HG0548530.1, HORVU.MOREX.r3.6HG0550310.1, HORVU.MOREX.r3.6HG0550450.1, HORVU.MOREX.r3.6HG0550570.1, HORVU.MOREX.r3.6HG0550700.1, HORVU.MOREX.r3.6HG0550740.1, HORVU.MOREX.r3.6HG0568860.1
Poaceae Lolium multiflorum 92 gene-QYE76_000752, gene-QYE76_000859, gene-QYE76_000860 ...
gene-QYE76_001240, gene-QYE76_003475, gene-QYE76_003977, gene-QYE76_005386, gene-QYE76_006557, gene-QYE76_006923, gene-QYE76_008909, gene-QYE76_010286, gene-QYE76_012399, gene-QYE76_012453, gene-QYE76_013502, gene-QYE76_019292, gene-QYE76_019294, gene-QYE76_019301, gene-QYE76_019420, gene-QYE76_019422, gene-QYE76_019423, gene-QYE76_019424, gene-QYE76_019645, gene-QYE76_019691, gene-QYE76_019693, gene-QYE76_019699, gene-QYE76_019712, gene-QYE76_019717, gene-QYE76_019718, gene-QYE76_019721, gene-QYE76_019728, gene-QYE76_019729, gene-QYE76_019730, gene-QYE76_019733, gene-QYE76_019735, gene-QYE76_019736, gene-QYE76_019737, gene-QYE76_019740, gene-QYE76_019743, gene-QYE76_020257, gene-QYE76_020603, gene-QYE76_020624, gene-QYE76_020725, gene-QYE76_021361, gene-QYE76_024521, gene-QYE76_025786, gene-QYE76_025800, gene-QYE76_027268, gene-QYE76_029345, gene-QYE76_035824, gene-QYE76_036699, gene-QYE76_039318, gene-QYE76_039755, gene-QYE76_039911, gene-QYE76_039917, gene-QYE76_043927, gene-QYE76_046998, gene-QYE76_049342, gene-QYE76_049346, gene-QYE76_049365, gene-QYE76_049422, gene-QYE76_049424, gene-QYE76_049425, gene-QYE76_049427, gene-QYE76_049430, gene-QYE76_049697, gene-QYE76_049715, gene-QYE76_049894, gene-QYE76_051216, gene-QYE76_051225, gene-QYE76_051226, gene-QYE76_051269, gene-QYE76_052014, gene-QYE76_052016, gene-QYE76_052017, gene-QYE76_052023, gene-QYE76_052029, gene-QYE76_052750, gene-QYE76_052751, gene-QYE76_054890, gene-QYE76_054891, gene-QYE76_054893, gene-QYE76_054894, gene-QYE76_054917, gene-QYE76_054920, gene-QYE76_055565, gene-QYE76_056687, gene-QYE76_056871, gene-QYE76_060038, gene-QYE76_062322, gene-QYE76_062325, gene-QYE76_063252, gene-QYE76_066332
Poaceae Oryza coarctata 15 Oco03G006820, Oco03G006830, Oco04G007110, Oco13G000770 ...
Oco14G010750, Oco14G012670, Oco19G000640, Oco19G000650, Oco19G000900, Oco20G000660, Oco20G000700, Oco20G000720, Oco20G000740, Oco20G000800, Oco20G001050
Poaceae Oryza sativa 23 LOC_Os02g15160.1, LOC_Os05g25580.1, LOC_Os10g04690.1 ...
LOC_Os10g04700.2, LOC_Os10g04750.1, LOC_Os10g04770.1, LOC_Os10g04780.1, LOC_Os10g04850.1, LOC_Os10g04950.1, LOC_Os10g04980.1, LOC_Os10g05000.1, LOC_Os10g05010.1, LOC_Os10g05200.1, LOC_Os10g05210.1, LOC_Os10g05240.1, LOC_Os10g05520.1, LOC_Os10g05530.1, LOC_Os10g05540.1, LOC_Os10g05590.1, LOC_Os10g06700.1, LOC_Os10g10980.1, LOC_Os11g06580.1, LOC_Os11g38840.1
Poaceae Paspalum vaginatum 22 gene-BS78_01G260300, gene-BS78_01G262200, gene-BS78_K013100 ...
gene-BS78_01G262800, gene-BS78_04G135300, gene-BS78_05G031300, gene-BS78_05G217400, gene-BS78_05G218100, gene-BS78_06G189900, gene-BS78_07G121200, gene-BS78_07G121300, gene-BS78_09G117300, gene-BS78_09G117600, gene-BS78_10G242600, gene-BS78_K169300, gene-BS78_K169400, gene-BS78_K169600, gene-BS78_K288200, gene-BS78_K288300, gene-BS78_K288400, gene-BS78_K288600, gene-BS78_K288700
Poaceae Puccinellia tenuiflora 48 Pt_Chr0104540, Pt_Chr0106656, Pt_Chr0200641, Pt_Chr0200881 ...
Pt_Chr0200895, Pt_Chr0200901, Pt_Chr0200962, Pt_Chr0201007, Pt_Chr0201016, Pt_Chr0201033, Pt_Chr0201036, Pt_Chr0201039, Pt_Chr0201040, Pt_Chr0201046, Pt_Chr0201047, Pt_Chr0201052, Pt_Chr0201053, Pt_Chr0201055, Pt_Chr0201056, Pt_Chr0201091, Pt_Chr0201176, Pt_Chr0202832, Pt_Chr0202835, Pt_Chr0202838, Pt_Chr0203214, Pt_Chr0205583, Pt_Chr0205584, Pt_Chr0205590, Pt_Chr0205677, Pt_Chr0205678, Pt_Chr0205680, Pt_Chr0206019, Pt_Chr0207040, Pt_Chr0207245, Pt_Chr0207254, Pt_Chr0207257, Pt_Chr0207260, Pt_Chr0207262, Pt_Chr0300256, Pt_Chr0306278, Pt_Chr0307507, Pt_Chr0601161, Pt_Chr0601174, Pt_Chr0601306, Pt_Chr0700541, Pt_Chr0704770, Pt_Chr0705000, Pt_Chr0705263
Poaceae Sporobolus alterniflorus 11 Chr01G021990, Chr02G022660, Chr04G022830, Chr05G013540 ...
Chr06G024620, Chr13G022370, Chr18G007030, Chr22G010300, Chr25G016010, Chr25G016020, Chr25G016030
Poaceae Thinopyrum elongatum 62 Tel1E01G353200, Tel1E01G728200, Tel2E01G1037700 ...
Tel3E01G026300, Tel3E01G028500, Tel3E01G028600, Tel3E01G119300, Tel3E01G119500, Tel3E01G120400, Tel3E01G136700, Tel3E01G136900, Tel3E01G565700, Tel3E01G702500, Tel3E01G702800, Tel3E01G704100, Tel3E01G913900, Tel5E01G108300, Tel5E01G108600, Tel5E01G650000, Tel6E01G033400, Tel6E01G034900, Tel6E01G035400, Tel6E01G042700, Tel6E01G102100, Tel6E01G136900, Tel6E01G137000, Tel6E01G137500, Tel6E01G139500, Tel6E01G139900, Tel6E01G142300, Tel6E01G143000, Tel6E01G143200, Tel6E01G144500, Tel6E01G147100, Tel6E01G147500, Tel6E01G152500, Tel6E01G154200, Tel6E01G154300, Tel6E01G154700, Tel6E01G155200, Tel6E01G155500, Tel6E01G155600, Tel6E01G155700, Tel6E01G157200, Tel6E01G169800, Tel6E01G170500, Tel6E01G170700, Tel6E01G171600, Tel6E01G174200, Tel6E01G176000, Tel6E01G176100, Tel6E01G176200, Tel6E01G176400, Tel6E01G178000, Tel6E01G178500, Tel6E01G179000, Tel6E01G179900, Tel6E01G752200, Tel6E01G752300, Tel7E01G174500, Tel7E01G854100, Telscf55701G000100
Poaceae Triticum dicoccoides 34 gene_TRIDC1AG030950, gene_TRIDC1AG045240 ...
gene_TRIDC1AG063250, gene_TRIDC1BG036420, gene_TRIDC1BG072540, gene_TRIDC2AG003470, gene_TRIDC2BG026970, gene_TRIDC3AG050840, gene_TRIDC3BG012610, gene_TRIDC3BG057250, gene_TRIDC3BG070590, gene_TRIDC4AG049780, gene_TRIDC5AG044160, gene_TRIDC5BG048100, gene_TRIDC5BG064490, gene_TRIDC6AG000820, gene_TRIDC6AG000900, gene_TRIDC6AG007830, gene_TRIDC6AG007870, gene_TRIDC6AG008020, gene_TRIDC6AG009290, gene_TRIDC6AG009490, gene_TRIDC6AG022290, gene_TRIDC6BG001370, gene_TRIDC6BG001560, gene_TRIDC6BG001650, gene_TRIDC6BG009920, gene_TRIDC6BG009930, gene_TRIDC6BG009970, gene_TRIDC6BG009990, gene_TRIDC6BG010110, gene_TRIDC6BG011200, gene_TRIDC6BG011500, gene_TRIDC6BG014220
Poaceae Triticum aestivum 210 TraesCS1A02G063400.1, TraesCS1A02G205000.1.cds1 ...
TraesCS1A02G283700.2, TraesCS1A02G431000.1, TraesCS1B02G218600.1.cds1, TraesCS1B02G292900.2, TraesCS1B02G465800.1, TraesCS1D02G208300.1.cds1, TraesCS1D02G282800.1, TraesCS1D02G440200.1, TraesCS2A02G032900.1.cds1, TraesCS2A02G083800.1, TraesCS2A02G180500.2, TraesCS2A02G181100.1, TraesCS2B02G098000.1, TraesCS2B02G098300.1, TraesCS2B02G206600.1, TraesCS2B02G207300.1, TraesCS2B02G207700.1, TraesCS2D02G081800.1.cds1, TraesCS2D02G114000.1.cds1, TraesCS2D02G188900.1, TraesCS2D02G189000.1, TraesCS3A02G015700.1.cds1, TraesCS3A02G015900.1.cds1, TraesCS3A02G063100.1.cds1, TraesCS3A02G063500.1.cds1, TraesCS3A02G064000.1.cds1, TraesCS3A02G064200.1, TraesCS3A02G075300.1, TraesCS3A02G353100.1, TraesCS3A02G445100.1, TraesCS3A02G445700.1, TraesCS3A02G445800.1, TraesCS3A02G446100.1, TraesCS3B02G075200.1, TraesCS3B02G075400.1, TraesCS3B02G076200.1.cds1, TraesCS3B02G076400.1, TraesCS3B02G076500.1, TraesCS3B02G076600.1, TraesCS3B02G076700.1, TraesCS3B02G076800.1, TraesCS3B02G089200.2, TraesCS3B02G385800.1, TraesCS3B02G479700.1, TraesCS3B02G479800.1, TraesCS3B02G480400.1.cds1, TraesCS3B02G480500.1, TraesCS3B02G480600.1, TraesCS3B02G480700.1.cds1, TraesCS3B02G481200.1, TraesCS3D02G013100.1, TraesCS3D02G013200.1.cds1, TraesCS3D02G062800.1.cds1, TraesCS3D02G063200.1.cds1, TraesCS3D02G063500.1, TraesCS3D02G063900.1, TraesCS3D02G064600.1, TraesCS3D02G075300.1, TraesCS3D02G347200.1, TraesCS3D02G437700.1, TraesCS3D02G437800.1, TraesCS3D02G437900.1, TraesCS4A02G309100.1, TraesCS4B02G004100.1, TraesCS4D02G005200.1, TraesCS5B02G052200.1, TraesCS5B02G294300.1, TraesCS5B02G544300.1, TraesCS5D02G057900.1, TraesCS5D02G058300.1, TraesCS5D02G302500.1.cds1, TraesCS6A02G006600.1, TraesCS6A02G006700.1.cds1, TraesCS6A02G006800.1, TraesCS6A02G007500.1, TraesCS6A02G007600.1, TraesCS6A02G007700.2, TraesCS6A02G008200.1, TraesCS6A02G027100.1, TraesCS6A02G039700.1, TraesCS6A02G054300.1, TraesCS6A02G057000.1, TraesCS6A02G057500.1, TraesCS6A02G057600.1, TraesCS6A02G057800.1, TraesCS6A02G058100.1, TraesCS6A02G061800.1, TraesCS6A02G062100.1, TraesCS6A02G062200.1, TraesCS6A02G062500.1, TraesCS6A02G063700.1, TraesCS6A02G064000.1, TraesCS6A02G072900.1.cds1, TraesCS6A02G073100.1.cds1, TraesCS6A02G073200.1.cds1, TraesCS6A02G073500.1, TraesCS6A02G075600.1, TraesCS6A02G075800.1.cds1, TraesCS6A02G076400.2, TraesCS6A02G077100.1, TraesCS6A02G077200.1.cds1, TraesCS6A02G307000.1.cds1, TraesCS6A02G408500.1, TraesCS6B02G012600.1, TraesCS6B02G013700.9, TraesCS6B02G014100.1, TraesCS6B02G067400.1, TraesCS6B02G067900.1.cds1, TraesCS6B02G074400.1, TraesCS6B02G074500.2, TraesCS6B02G074600.1, TraesCS6B02G074700.1, TraesCS6B02G074900.1, TraesCS6B02G075000.1, TraesCS6B02G075400.1, TraesCS6B02G077700.1, TraesCS6B02G083000.3, TraesCS6B02G083300.1, TraesCS6B02G083400.1, TraesCS6B02G083600.1, TraesCS6B02G083700.1.cds1, TraesCS6B02G083800.1, TraesCS6B02G084600.1, TraesCS6B02G085300.2, TraesCS6B02G086000.1, TraesCS6B02G087900.1, TraesCS6B02G098000.1.cds1, TraesCS6B02G098100.1, TraesCS6B02G098200.1, TraesCS6B02G098500.1.cds1, TraesCS6B02G098600.1, TraesCS6B02G100500.1, TraesCS6B02G100600.1, TraesCS6B02G100900.1.cds1, TraesCS6B02G101100.1.cds1, TraesCS6B02G101200.1, TraesCS6B02G101600.1, TraesCS6B02G102400.1, TraesCS6B02G103100.1, TraesCS6B02G103400.1.cds1, TraesCS6B02G103600.1, TraesCS6B02G103700.1.cds1, TraesCS6B02G377900.1, TraesCS6B02G454700.1.cds1, TraesCS6D02G010000.1, TraesCS6D02G011000.1, TraesCS6D02G011800.1, TraesCS6D02G012000.1, TraesCS6D02G012800.1, TraesCS6D02G030900.1, TraesCS6D02G055700.1.cds1, TraesCS6D02G056400.1.cds1, TraesCS6D02G057500.1, TraesCS6D02G058000.1, TraesCS6D02G058100.1.cds1, TraesCS6D02G058400.1.cds1, TraesCS6D02G058500.1, TraesCS6D02G058800.1, TraesCS6D02G059000.1, TraesCS6D02G060800.1, TraesCS6D02G061100.1, TraesCS6D02G062400.1, TraesCS6D02G062600.1, TraesCS6D02G063500.1, TraesCS6D02G070700.1, TraesCS6D02G070800.2, TraesCS6D02G071300.1, TraesCS6D02G071500.1, TraesCS6D02G071900.1, TraesCS6D02G364000.1.cds1, TraesCS6D02G392400.1.cds1, TraesCS7A02G565300.1.cds1, TraesCS7A02G567100.1, TraesCS7B02G041300.1, TraesCS7B02G303500.1, TraesCS7B02G494400.1, TraesCS7B02G494800.1.cds1, TraesCS7B02G497800.1.cds1, TraesCS7B02G498200.1.cds1, TraesCS7B02G498500.1.cds1, TraesCS7D02G077500.1, TraesCS7D02G141000.1, TraesCS7D02G544400.1, TraesCSU02G025900.1, TraesCSU02G026300.1, TraesCSU02G026700.1, TraesCSU02G026900.1.cds1, TraesCSU02G027000.1, TraesCSU02G027500.1, TraesCSU02G027800.2, TraesCSU02G028000.1, TraesCSU02G028800.1, TraesCSU02G029200.1.cds1, TraesCSU02G056500.1.cds1, TraesCSU02G066800.1, TraesCSU02G066900.1, TraesCSU02G078500.1, TraesCSU02G110000.1, TraesCSU02G118200.1, TraesCSU02G119000.1, TraesCSU02G119100.1, TraesCSU02G120400.1, TraesCSU02G133400.1.cds1, TraesCSU02G133500.1.cds1, TraesCSU02G133800.1, TraesCSU02G141700.1, TraesCSU02G193700.1, TraesCSU02G235100.1.cds1
Poaceae Zea mays 2 Zm00001eb285670_P001, Zm00001eb346560_P001
Poaceae Zoysia japonica 5 nbis-gene-34195, nbis-gene-39366, nbis-gene-42294 ...
nbis-gene-43021, nbis-gene-43033
Poaceae Zoysia macrostachya 5 Zma_g13023, Zma_g13062, Zma_g15396, Zma_g15832, Zma_g19281
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.