Basic Information
Locus ID:
Oco03G005860
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 5472452 | 5482286 | + | Oco03G005860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 86,501.72 Da | 38.33 | 98.27 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 1.7E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 512 | 678 | 3.6E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 503 | 729 | 7.83E-40 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 155 | 452 | 2.72E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 732 | 5.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 355 | 439 | 2.3E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 354 | 2.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 154 | 232 | 1.8E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 153 | 3.1E-14 | IPR032675 |
| SMART | SM00220 | serkin_6 | 506 | 729 | 2.9E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 468 | 751 | 13.729074 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_015626475.1 | receptor-like protein kinase HSL1 [Oryza sativa Japonica Group] | 0 |
| G7JIK2 | Leucine-rich repeat receptor-like kinase protein SUNN OS=Medicago truncatula OX=3880 GN=SUNN PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1FBG8 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_023435 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology