Basic Information
Locus ID:
Oco03G005370
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 4763203 | 4774414 | + | Oco03G005370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.42 | 95,104.44 Da | 102.66 | 47.54 | -1.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 11 | 175 | 3.6E-43 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 4 | 178 | 4.82E-68 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 182 | 3.1E-74 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 176 | 40.602703 | IPR002130 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 59 | 76 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 1.3E-28 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 1.3E-28 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 1.3E-28 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 1.3E-28 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 1.3E-28 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 711 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 665 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 812 | 833 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 549 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 805 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 849 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 587 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.2 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_015626221.1 | peptidyl-prolyl cis-trans isomerase CYP95 isoform X2 [Oryza sativa Japonica Group] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0NBD5 | PPIase cyclophilin-type domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology