Basic Information
Locus ID:
Oco03G005290
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 4661697 | 4666493 | - | Oco03G005290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 77,209.65 Da | 47.46 | 89.82 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 416 | 687 | 5.37853E-88 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 166 | 188 | 1.9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 684 | 3.9E-44 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 96 | 153 | 8.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 69 | 1.6E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 685 | 8.9E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 248 | 9.23E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 374 | 487 | 7.3E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 706 | 1.2E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 256 | 1.1E-50 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 188 | 210 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 187 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 163 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 122 | 20.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 687 | 37.17738 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 164 | 177 | 4.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 97 | 110 | 4.5E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 289 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_015627233.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Oryza sativa Japonica Group] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | B9F3S7 | Os02g0190500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0190500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology