Basic Information
Locus ID:
Oco03G004660
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 4082189 | 4086398 | - | Oco03G004660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.69 | 42,291.44 Da | 54.57 | 54.33 | -1.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 189 | 273 | 2.3E-27 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 294 | - | - |
| Coils | Coil | Coil | 204 | 224 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_015624673.1 | protein WVD2-like 5 [Oryza sativa Japonica Group] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0JWZ7 | TPX2 domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology