Basic Information
Locus ID:
Oco03G003680
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 3057057 | 3059272 | + | Oco03G003680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 71,678.22 Da | 39.83 | 87.67 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 116 | 176 | 1.5E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 86 | 6.1E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 381 | 590 | 6.5E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 664 | 2.77E-47 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 232 | 2.15E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 251 | 2.4E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 454 | 665 | 1.6E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 207 | 1.8E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 453 | 6.9E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 378 | 679 | 25.757107 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 679 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50610.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_040376282.1 | pollen receptor-like kinase 5 [Oryza brachyantha] | 0 |
| Q9LPT1 | Pollen receptor-like kinase 5 OS=Arabidopsis thaliana OX=3702 GN=PRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1D354 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_009143 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology