Basic Information
Locus ID:
Oco03G000770
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG03 | 683837 | 687326 | + | Oco03G000770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 109,409.79 Da | 33.87 | 98.48 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 740 | 1012 | 3.50949E-98 | - |
| Pfam | PF13855 | Leucine rich repeat | 404 | 463 | 1.4E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 735 | 1010 | 5.2E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 76 | 1.2E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 84 | 187 | 3.29E-14 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 720 | 1012 | 3.55E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 167 | 617 | 5.78E-67 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 709 | 809 | 1.6E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 294 | 633 | 1.4E-90 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 810 | 1029 | 6.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 193 | 1.9E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 292 | 6.3E-25 | IPR032675 |
| SMART | SM00220 | serkin_6 | 734 | 1012 | 1.4E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 351 | 374 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 559 | 583 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 426 | 450 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 126 | 7.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 268 | 291 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 220 | 244 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 734 | 1012 | 38.70385 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 861 | 873 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 740 | 762 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02220.1 | phytosulfokin receptor 1. Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). | 0 |
| RefSeq | XP_040376600.1 | phytosulfokine receptor 1-like [Oryza brachyantha] | 0 |
| Q9ZVR7 | Phytosulfokine receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSKR1 PE=1 SV=4 | 0 | |
| TrEMBL | A0A6G1FDM1 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_029489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0099290, gene-QOZ80_2BG0152720 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0546030.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_019570, gene-QYE76_019571 |
| Poaceae | Oryza coarctata | 2 | Oco03G000770, Oco04G000710 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g02490.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G012100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201128 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G117700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG005390, gene_TRIDC6BG007810 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G044700.1.cds1, TraesCS6B02G061000.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb229960_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52092 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12066 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g21260 |