Basic Information
Locus ID:
Oco02G032580
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 34514957 | 34531915 | - | Oco02G032580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 104,536.16 Da | 40.90 | 94.52 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 619 | 885 | 9.55881E-96 | - |
| Pfam | PF13855 | Leucine rich repeat | 149 | 209 | 2.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 618 | 882 | 2.0E-46 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 67 | 9.3E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 292 | 328 | 7.9E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 599 | 917 | 1.26E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 386 | 6.23E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 411 | 8.8E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 192 | 5.5E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 575 | 688 | 2.2E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 689 | 898 | 1.7E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 264 | 3.8E-13 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 315 | 339 | 0.47 | IPR003591 |
| SMART | SM00220 | serkin_6 | 613 | 885 | 8.8E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 24.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 613 | 885 | 38.619049 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 733 | 745 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 619 | 641 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006645416.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Oryza brachyantha] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | J3L8F7 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102711112 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology