Basic Information
Locus ID:
Oco02G031980
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 34080861 | 34084058 | - | Oco02G031980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 59,845.61 Da | 44.93 | 73.10 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 270 | 496 | 2.1E-60 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 13 | 227 | 3.1E-66 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 17 | 497 | 1.4E-191 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 286 | 462 | 1.4E-191 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 535 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_006646728.3 | proteinaceous RNase P 2 [Oryza brachyantha] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0N836 | ribonuclease P OS=Oryza rufipogon OX=4529 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology