Basic Information
Locus ID:
Oco02G030760
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 32960019 | 32962734 | + | Oco02G030760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.39 | 22,050.99 Da | 47.68 | 72.97 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 165 | 201 | 3.17058E-17 | - |
| Pfam | PF01849 | NAC domain | 64 | 119 | 7.7E-24 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 162 | 201 | 5.7E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 70 | 123 | 3.1E-32 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 163 | 200 | 1.0E-18 | - |
| SMART | SM01407 | NAC_2 | 64 | 120 | 2.2E-27 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 61 | 126 | 18.128395 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_015622168.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Oryza sativa Japonica Group] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | Q7F347 | Os01g0938900 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0938900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology