Basic Information
Locus ID:
Oco02G029850
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 32193553 | 32198552 | + | Oco02G029850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 75,041.09 Da | 43.34 | 64.64 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 84 | 112 | 1.67507E-5 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 84 | 120 | 1.6E-8 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 590 | 640 | 3.7E-9 | IPR024593 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 474 | 591 | 4.6E-31 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 84 | 134 | 9.55E-9 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 77 | 152 | 3.0E-9 | IPR036869 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 55 | 123 | 10.163859 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 100 | 119 | - | IPR018253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 294 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_015633906.1 | uncharacterized protein LOC4327255 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A6G1EM52 | J domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_016710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology