Basic Information
Locus ID:
Oco02G024100
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 27060048 | 27070220 | - | Oco02G024100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 103,812.29 Da | 41.28 | 93.32 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 629 | 893 | 2.93197E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 627 | 892 | 6.9E-47 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 157 | 216 | 2.0E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 76 | 1.2E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 392 | 5.55E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 608 | 921 | 1.37E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 298 | 387 | 7.4E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 297 | 5.2E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 196 | 2.3E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 596 | 698 | 1.3E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 699 | 905 | 9.3E-58 | - |
| SMART | SM00220 | serkin_6 | 623 | 895 | 9.2E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 623 | 895 | 38.025421 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 629 | 651 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 743 | 755 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015699312.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Oryza brachyantha] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1BWC8 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_013528 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology