Basic Information
Locus ID:
Oco02G023970
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 26920940 | 26924023 | + | Oco02G023970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 20,909.86 Da | 23.27 | 94.75 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 132 | 2.7E-29 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 139 | 9.02E-47 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 167 | 1.4E-52 | - |
| SMART | SM00220 | serkin_6 | 2 | 173 | 3.2E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 183 | 26.336601 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 51 | 63 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006644901.1 | leucine-rich repeat receptor protein kinase HPCA1-like [Oryza brachyantha] | 0 |
| Q9LT96 | Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana OX=3702 GN=At5g49770 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0JQ96 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 2 | Oco02G023950, Oco02G023970 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-11608, nbis-gene-12261, nbis-gene-3395 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g05690, gene.Posoc02g05730 |