Basic Information
Locus ID:
Oco02G022040
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
HMT3
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 25035172 | 25037334 | + | Oco02G022040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 36,306.67 Da | 50.84 | 81.39 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 56 | 321 | 1.8E-47 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 56 | 324 | 7.46E-47 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 49 | 330 | 2.4E-58 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 1 | 322 | 26.898418 | IPR003726 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 145 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22740.1 | homocysteine S-methyltransferase 3. homocysteine S-methyltransferase (HMT3) | 0 |
| RefSeq | XP_052134789.1 | homocysteine S-methyltransferase 4-like [Oryza glaberrima] | 0 |
| Q9FUM7 | Homocysteine S-methyltransferase 4 OS=Zea mays OX=4577 GN=HMT-4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0FTT2 | Hcy-binding domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology