Basic Information
Locus ID:
Oco02G020350
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 23506451 | 23509767 | + | Oco02G020350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 112,987.08 Da | 36.02 | 95.94 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 712 | 1003 | 3.29314E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 72 | 1.9E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 709 | 1002 | 1.0E-40 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 296 | 356 | 2.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 76 | 135 | 7.0E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 701 | 1004 | 2.56E-69 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 79 | 430 | 1.26E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 376 | 601 | 9.18E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 696 | 790 | 4.5E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 290 | 3.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 182 | 5.0E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 370 | 627 | 1.9E-61 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 1026 | 3.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 369 | 7.3E-20 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 15.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 706 | 1010 | 2.8E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 343 | 367 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 441 | 463 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 532 | 556 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 196 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 245 | 269 | 18.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 706 | 1014 | 35.636772 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 855 | 867 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 712 | 740 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1038 | 1057 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1025 | 1057 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_015618104.1 | receptor-like protein kinase HSL1 [Oryza sativa Japonica Group] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9YES8 | Protein kinase domain-containing protein OS=Oryza glumipatula OX=40148 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology