Basic Information
Locus ID:
Oco02G017310
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 20499243 | 20505890 | + | Oco02G017310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 71,390.61 Da | 52.98 | 92.84 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 2.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 97 | 156 | 3.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 365 | 616 | 1.5E-21 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 159 | 7.65E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 363 | 616 | 5.84E-36 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 192 | 4.7E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 627 | 4.6E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 326 | 434 | 7.7E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 352 | 620 | 18.153015 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 204 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_052146191.1 | protein MALE DISCOVERER 2-like [Oryza glaberrima] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DXZ9 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_017836 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology