Basic Information
Locus ID:
Oco02G013450
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 16366408 | 16368601 | + | Oco02G013450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 47,897.78 Da | 43.77 | 88.58 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 148 | 278 | 2.88E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 118 | 403 | 1.6E-5 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025879126.1 | putative FBD-associated F-box protein At5g56390 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A1E5W1K4 | FBD domain-containing protein (Fragment) OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0007694 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH02.2210, BH03.345, CH02.2359 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1AG0022050 |
| Poaceae | Oryza coarctata | 2 | Oco01G013310, Oco02G013450 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g40120.1, LOC_Os01g40160.1 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G453400.1 |