Basic Information
Locus ID:
Oco02G013280
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 16155174 | 16159156 | - | Oco02G013280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 72,802.49 Da | 33.67 | 98.13 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 681 | 1.1E-37 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 150 | 209 | 2.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 74 | 2.1E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 681 | 2.11E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 244 | 1.21E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 146 | 1.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 262 | 3.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 493 | 4.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 684 | 1.1E-39 | - |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 123 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 22.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 684 | 26.675817 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006646028.3 | LRR receptor-like serine/threonine-protein kinase GSO2 [Oryza brachyantha] | 0 |
| Q9LK03 | Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana OX=3702 GN=PERK2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0E0JKD4 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology