Basic Information
Locus ID:
Oco02G008160
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the pyruvate kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 8191866 | 8198672 | - | Oco02G008160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.53 | 24,286.26 Da | 24.84 | 92.87 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00224 | Pyruvate kinase, barrel domain | 33 | 216 | 2.0E-53 | IPR015793 |
| SUPERFAMILY | SSF51621 | Phosphoenolpyruvate/pyruvate domain | 52 | 216 | 2.69E-16 | IPR015813 |
| SUPERFAMILY | SSF50800 | PK beta-barrel domain-like | 59 | 158 | 1.53E-26 | IPR011037 |
| Gene3D | G3DSA:3.20.20.60 | - | 47 | 216 | 1.3E-51 | IPR040442 |
| Gene3D | G3DSA:2.40.33.10 | - | 59 | 159 | 1.3E-51 | IPR015806 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 48 | 64 | 4.7E-11 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 178 | 192 | 4.7E-11 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 208 | 216 | 4.7E-11 | IPR001697 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00230 (Purine metabolism)
map00230 (Purine metabolism)
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Module:
Reaction:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56350.1 | Pyruvate kinase family protein. | 0 |
| RefSeq | XP_015619741.1 | pyruvate kinase, cytosolic isozyme [Oryza sativa Japonica Group] | 0 |
| Q42806 | Pyruvate kinase, cytosolic isozyme OS=Glycine max OX=3847 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1DYD0 | Pyruvate kinase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020620 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology