Basic Information
Locus ID:
Oco02G006580
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 6688254 | 6699662 | + | Oco02G006580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 108,923.42 Da | 57.12 | 81.11 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 362 | 680 | 1.2E-105 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 26 | 142 | 1.8E-15 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 356 | 713 | 8.07E-117 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 26 | 155 | 3.48E-26 | IPR036872 |
| Gene3D | G3DSA:1.10.418.10 | - | 11 | 170 | 1.5E-29 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 351 | 722 | 4.3E-130 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 354 | 688 | 7.7E-157 | IPR001752 |
| SMART | SM00033 | ch_5 | 26 | 137 | 5.9E-13 | IPR001715 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 24 | 142 | 18.846331 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 356 | 680 | 118.903595 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 580 | 591 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 428 | 449 | 1.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 551 | 568 | 1.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 581 | 599 | 1.9E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 630 | 651 | 1.9E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 942 | 961 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 940 | 986 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 860 | 924 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 726 | 764 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 726 | 742 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 882 | 924 | - | - |
| Coils | Coil | Coil | 336 | 356 | - | - |
| Coils | Coil | Coil | 687 | 721 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10310.2 | - | 0 |
| RefSeq | XP_052153403.1 | kinesin-like protein KIN-14A isoform X2 [Oryza glaberrima] | 0 |
| B9EUM5 | Kinesin-like protein KIN-14A OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14A PE=2 SV=2 | 0 | |
| TrEMBL | A0A6G1DZT5 | Kinesin-like protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020994 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology