Basic Information
Locus ID:
Oco02G006420
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 6530123 | 6534096 | + | Oco02G006420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 107,196.70 Da | 32.30 | 104.64 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 690 | 915 | 1.6E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 63 | 6.0E-10 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 266 | 585 | 5.49E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 966 | 1.04E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 83 | 349 | 2.21E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 773 | 3.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 618 | 1.5E-87 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 280 | 2.4E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 774 | 988 | 1.2E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 178 | 2.6E-37 | IPR032675 |
| SMART | SM00220 | serkin_6 | 687 | 988 | 1.8E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 978 | 37.120842 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 693 | 716 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 818 | 830 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_052162141.1 | receptor-like protein kinase HSL1 [Oryza glaberrima] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DYW7 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020962 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology