halophFGD

Basic Information

Locus ID: Oco02G006120

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description: Phosphatidylinositol 3- and 4-kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG02	6204643	6206841	-	Oco02G006120

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.46	54,835.29 Da	43.87	89.67	-0.22

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00454	Phosphatidylinositol 3- and 4-kinase	201	429	6.3E-35	IPR000403
SUPERFAMILY	SSF54236	Ubiquitin-like	64	120	1.24E-5	IPR029071

KEGG Pathway

KO Term:

K08770 (ubiquitin C)

Pathway:

ko03320 (PPAR signaling pathway) map03320 (PPAR signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G46500.1	phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.
RefSeq	XP_015631743.1	phosphatidylinositol 4-kinase gamma 2 isoform X1 [Oryza sativa Japonica Group]
Swiss-Prot	Q9ZPY9	Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1
TrEMBL	A0A6G1DYW1	1-phosphatidylinositol 4-kinase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_020923 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Oryza coarctata	2	Oco01G006070, Oco02G006120