Basic Information
Locus ID:
Oco02G005490
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 5571623 | 5574494 | - | Oco02G005490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 87,627.72 Da | 40.61 | 86.42 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 493 | 758 | 1.48423E-89 | - |
| CDD | cd01098 | PAN_AP_plant | 337 | 420 | 1.25919E-18 | - |
| Pfam | PF01453 | D-mannose binding lectin | 98 | 200 | 1.1E-14 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 243 | 318 | 6.4E-7 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 346 | 404 | 4.1E-10 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 490 | 753 | 9.0E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 469 | 757 | 2.29E-80 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 105 | 195 | 1.44E-11 | IPR036426 |
| Gene3D | G3DSA:2.90.10.30 | - | 47 | 188 | 5.5E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 457 | 562 | 2.0E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 563 | 770 | 1.5E-60 | - |
| SMART | SM00108 | blect_4 | 53 | 177 | 1.3E-5 | IPR001480 |
| SMART | SM00220 | serkin_6 | 487 | 756 | 4.5E-40 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 19 | 793 | 3.3E-215 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 340 | 421 | 8.064659 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 487 | 767 | 37.827545 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 47 | 173 | 11.110773 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 493 | 516 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 607 | 619 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_015621848.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Oryza sativa Japonica Group] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5S6RCP1 | Receptor-like serine/threonine-protein kinase OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0224000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology