Basic Information
Locus ID:
Oco02G004720
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 4736222 | 4740714 | - | Oco02G004720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 74,476.18 Da | 40.07 | 90.24 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 396 | 644 | 2.9E-22 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 81 | 3.7E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 110 | 168 | 2.8E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 173 | 4.25E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 386 | 644 | 2.23E-35 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 195 | 9.8E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 361 | 465 | 1.2E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 466 | 656 | 2.8E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 383 | 648 | 17.008162 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_052147296.1 | protein MALE DISCOVERER 2-like isoform X2 [Oryza glaberrima] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1ELL5 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014967 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology