Basic Information
Locus ID:
Oco02G003800
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 3555443 | 3563897 | - | Oco02G003800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 62,662.55 Da | 39.42 | 74.05 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 118 | 491 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 446 | 490 | 1.2E-4 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 319 | 427 | 2.0E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 121 | 271 | 1.6E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 478 | 2.83E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 118 | 203 | 2.7E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 446 | 456 | 3.3E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 326 | 445 | 3.3E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 204 | 269 | 2.7E-62 | - |
| SMART | SM00220 | serkin_6 | 120 | 427 | 1.4E-103 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 428 | 492 | 4.4E-6 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 120 | 427 | 46.661293 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 428 | 500 | 12.699545 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 239 | 251 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 126 | 149 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 548 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_015699272.2 | serine/threonine-protein kinase 38 [Oryza brachyantha] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DVA6 | Non-specific serine/threonine protein kinase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_000663 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology