Basic Information
Locus ID:
Oco02G000190
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 137465 | 140320 | - | Oco02G000190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 102,451.14 Da | 44.17 | 100.45 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 679 | 947 | 1.6151E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 135 | 194 | 3.1E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 110 | 125 | 0.17 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 60 | 1.1E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 675 | 874 | 3.0E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 476 | 534 | 3.8E-12 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 430 | 564 | 5.1E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 653 | 944 | 9.44E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 21 | 324 | 5.27E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 228 | 346 | 4.0E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 634 | 748 | 9.7E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 749 | 951 | 3.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 133 | 2.6E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 134 | 227 | 5.7E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 362 | 580 | 3.1E-42 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 311 | 336 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 205 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 673 | 948 | 5.2E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 497 | 520 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 133 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 473 | 496 | 100.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 673 | 947 | 38.548378 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 679 | 701 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 793 | 805 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 497 | 510 | 3.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 113 | 126 | 3.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_006645425.3 | LRR receptor-like serine/threonine-protein kinase RPK2 [Oryza brachyantha] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | J3KVL9 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102713696 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology