Basic Information
Locus ID:
Oco01G030860
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 37039568 | 37042758 | - | Oco01G030860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 60,278.96 Da | 47.94 | 72.36 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 273 | 499 | 6.1E-61 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 12 | 231 | 1.0E-67 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 20 | 500 | 1.4E-188 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 289 | 465 | 1.4E-188 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 551 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_015621305.1 | proteinaceous RNase P 2 [Oryza sativa Japonica Group] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0N836 | ribonuclease P OS=Oryza rufipogon OX=4529 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology