Basic Information
Locus ID:
Oco01G029580
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 35876327 | 35879068 | + | Oco01G029580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 24,869.36 Da | 40.83 | 86.77 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 180 | 225 | 3.12778E-19 | - |
| Pfam | PF01849 | NAC domain | 88 | 143 | 2.2E-22 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 187 | 225 | 4.5E-11 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 187 | 224 | 6.0E-18 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 94 | 147 | 1.5E-31 | IPR038187 |
| SMART | SM01407 | NAC_2 | 88 | 144 | 1.3E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 85 | 150 | 17.778694 | IPR002715 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_015622168.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Oryza sativa Japonica Group] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0N7F4 | NAC-A/B domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology