Basic Information
Locus ID:
Oco01G023320
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 29473159 | 29483392 | - | Oco01G023320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 103,358.73 Da | 41.36 | 94.53 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 623 | 887 | 1.44275E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 70 | 2.1E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 621 | 886 | 7.3E-47 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 293 | 329 | 8.5E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 602 | 902 | 3.14E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 386 | 2.15E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 381 | 4.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 190 | 4.4E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 291 | 1.4E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 899 | 2.4E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 589 | 692 | 8.5E-36 | - |
| SMART | SM00220 | serkin_6 | 617 | 889 | 8.6E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 889 | 38.195026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015620925.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Oryza sativa Japonica Group] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | B9ETW6 | Protein kinase domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_03881 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology