Basic Information
Locus ID:
Oco01G023190
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 29335082 | 29348116 | + | Oco01G023190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 95,023.59 Da | 35.73 | 85.36 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 670 | 773 | 8.9E-7 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 591 | 660 | 6.4E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 574 | 782 | 2.24E-34 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 365 | 6.8E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 285 | 3.4E-45 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 657 | 793 | 4.5E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 561 | 656 | 9.3E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 588 | 859 | 11.283893 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 301 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015622185.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0FUW6 | Protein kinase domain-containing protein OS=Oryza nivara OX=4536 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology