Basic Information
Locus ID:
Oco01G020200
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CPK13
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 25936214 | 25941618 | - | Oco01G020200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 17,808.37 Da | 42.13 | 83.40 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 13 | 115 | 1.9E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 117 | 1.66E-23 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 119 | 1.5E-22 | - |
| SMART | SM00220 | serkin_6 | 1 | 158 | 6.7E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 159 | 16.004648 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.3 | - | 0 |
| RefSeq | XP_006660341.2 | calcium-dependent protein kinase 21-like [Oryza brachyantha] | 0 |
| Q6ZIU9 | Calcium-dependent protein kinase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1CJP4 | Calcium-dependent protein kinase 30 OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_026227 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco01G020200.