Basic Information
Locus ID:
Oco01G019500
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 25198583 | 25199456 | - | Oco01G019500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.01 | 25,973.08 Da | 62.42 | 67.32 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 49 | 147 | 2.8E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 197 | 1.18E-30 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 214 | 5.6E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 220 | 19.962168 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 228 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_015618104.1 | receptor-like protein kinase HSL1 [Oryza sativa Japonica Group] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A2ZXP6 | Protein kinase domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_03409 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 1 | Oco01G019500 |
| Poaceae | Zea mays | 2 | Zm00001eb230030_P001, Zm00001eb276950_P001 |