Basic Information
Locus ID:
Oco01G019310
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 24959571 | 24962647 | + | Oco01G019310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 49,442.86 Da | 62.83 | 70.43 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 200 | 421 | 8.49117E-80 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 196 | 420 | 8.5E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 181 | 421 | 7.42E-56 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 266 | 431 | 7.4E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 181 | 265 | 2.0E-11 | - |
| SMART | SM00220 | serkin_6 | 193 | 423 | 2.2E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 193 | 423 | 30.265854 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 305 | 317 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 151 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052141135.1 | serine/threonine/tyrosine-protein kinase HT1-like [Oryza glaberrima] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1E5R9 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_033432 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology