Basic Information
Locus ID:
Oco01G017510
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
ABC transporter transmembrane region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 23077131 | 23082683 | - | Oco01G017510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 19,609.39 Da | 31.57 | 92.43 | -0.26 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012700051.1 | uncharacterized protein LOC105914032 [Setaria italica] | 0 |
| P92519 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1 | 0 | |
| TrEMBL | Q10MB5 | Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g20080 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30198590 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_025322 |
| Poaceae | Oryza coarctata | 1 | Oco01G017510 |
| Poaceae | Sporobolus alterniflorus | 10 | Chr01G000210, Chr05G011570, Chr05G013330, Chr0G006590 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132628466 |