Basic Information
Locus ID:
Oco01G016560
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 21974423 | 21976564 | - | Oco01G016560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 54,539.54 Da | 42.02 | 91.12 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 190 | 455 | 8.43233E-105 | - |
| Pfam | PF00069 | Protein kinase domain | 185 | 452 | 4.5E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 168 | 465 | 1.48E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 260 | 482 | 1.2E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 166 | 259 | 8.6E-34 | - |
| SMART | SM00220 | serkin_6 | 184 | 457 | 1.2E-36 | IPR000719 |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 3 | 54 | 140.0 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 278 | 492 | 1.9E-10 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 178 | 277 | 0.01 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 184 | 447 | 38.350502 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 190 | 213 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 305 | 317 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 492 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015622343.1 | probable receptor-like protein kinase At2g42960 [Oryza sativa Japonica Group] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0E0JM30 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology