Basic Information
Locus ID:
Oco01G015560
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 20754200 | 20758954 | + | Oco01G015560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 42,995.55 Da | 46.24 | 76.55 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 88 | 356 | 4.89004E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 85 | 356 | 3.5E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 356 | 9.29E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 368 | 8.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 166 | 3.1E-20 | - |
| SMART | SM00220 | serkin_6 | 82 | 359 | 6.0E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 359 | 40.852219 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 223 | 235 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 283 | 305 | 3.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 179 | 192 | 3.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 327 | 349 | 3.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 217 | 235 | 3.4E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 74 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052137579.1 | serine/threonine-protein kinase STY13-like [Oryza glaberrima] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1D2Y4 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_012522 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology